STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01415.1Transporter, small conductance mechanosensitive ion channel family protein; KEGG: mla:Mlab_1701 0.00096 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00. (537 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.680
EKF01414.1
KEGG: hin:HI1462.2 0.99 hypothetical protein; K08296 phosphohistidine phosphatase.
       0.567
EKF03474.1
Hypothetical protein; KEGG: ade:Adeh_1329 7.3e-10 histidine kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.492
EKF03765.1
PAS domain S-box; KEGG: ter:Tery_3993 5.0e-60 adenylate/guanylate cyclase; Psort location: CytoplasmicMembrane, score: 9.27.
 
     0.429
EKE99262.1
TrkA-C domain protein; KEGG: mpa:MAP3299c 2.2e-05 hypothetical protein; K03426 NAD+ diphosphatase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.405
EKE98067.1
Hypothetical protein; KEGG: cts:Ctha_0209 0.93 phosphoribosylformylglycinamidine synthase, PurS; K01952 phosphoribosylformylglycinamidine synthase; Psort location: Cytoplasmic, score: 8.96.
 
     0.402
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.