STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01280.1Hypothetical protein; KEGG: tcr:408799.19 0.17 isopentenyl-diphosphate delta-isomerase; K01823 isopentenyl-diphosphate delta-isomerase; Psort location: CytoplasmicMembrane, score: 9.82. (156 aa)    
Predicted Functional Partners:
EKE99190.1
BNR/Asp-box repeat protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
   
 0.813
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.775
psaE
Photosystem I reaction center protein; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.774
EKF03127.1
Hypothetical protein; KEGG: osa:4345177 9.4e-07 Os08g0288200; hypothetical protein; K00939 adenylate kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.774
psaL
Photosystem I reaction center; KEGG: car:cauri_1558 0.84 cdsA; phosphatidate cytidylyltransferase K00981.
  
     0.773
psb28
Photosystem II protein W; KEGG: efa:EF0059 0.60 glmU; UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional protein GlmU; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the Psb28 family.
  
     0.773
EKF01125.1
Hypothetical protein; KEGG: rpb:RPB_4459 0.90 exodeoxyribonuclease VII small subunit K03602; Psort location: Cytoplasmic, score: 8.96.
  
     0.773
EKF00193.1
Hypothetical protein; KEGG: sth:STH1672 0.97 DNA topoisomerase III; K03169 DNA topoisomerase III.
  
     0.773
EKF03811.1
Hypothetical protein; KEGG: syr:SynRCC307_0367 0.54 xseB; exonuclease VII small subunit K03602; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.771
EKE99178.1
Photosystem II manganese; KEGG: cre:CHLREDRAFT_185200 0.43 ATP4; mitochondrial F1F0 ATP synthase, delta subunit K02134.
  
     0.771
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.