STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF01167.1Hypothetical protein; KEGG: ava:Ava_0501 0.0097 histidine kinase K00936. (70 aa)    
Predicted Functional Partners:
EKF01165.1
Transporter, monovalent cation:proton antiporter-2 family protein; KEGG: lsp:Bsph_2383 0.018 biotin synthase K03523; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.768
EKF01166.1
Hypothetical protein; KEGG: lac:LBA1099 0.55 phosphinothricin N-acetyltransferase; K03823 acetyltransferase.
       0.768
EKF01168.1
Polyketide cyclase/dehydrase; KEGG: cyb:CYB_1214 0.93 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589; Psort location: Cytoplasmic, score: 8.96.
       0.426
EKF01169.1
Sensor histidine kinase; KEGG: ava:Ava_4457 4.2e-247 GAF sensor signal transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
       0.426
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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