STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htpXPeptidase, M48 family; KEGG: ava:Ava_0088 9.9e-129 heat shock protein HtpX; K03799 heat shock protein HtpX; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase M48B family. (289 aa)    
Predicted Functional Partners:
EKF01045.1
Hypothetical protein; KEGG: tko:TK1596 0.0060 V-type ATP synthase subunit H K02121; Psort location: Cytoplasmic, score: 8.96.
       0.515
EKF01043.1
Hypothetical protein; KEGG: bha:BH3652 0.84 UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase.
       0.437
EKF01042.1
Hypothetical protein; KEGG: tet:TTHERM_01731490 0.00011 Leishmanolysin family protein K01404; Psort location: Cytoplasmic, score: 8.96.
       0.429
EKF00228.1
m48B subfamily peptidase; KEGG: msm:MSMEG_3476 1.4e-42 peptidase, M48 family protein K01417; Psort location: Cytoplasmic, score: 8.96.
  
     0.406
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.