STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF00809.1S8A subfamily subtilase; KEGG: bbe:BBR47_21070 5.1e-25 probable serine protease precursor; Psort location: Cytoplasmic, score: 9.26. (664 aa)    
Predicted Functional Partners:
EKF00813.1
Putative adenylation/heterocyclization protein; KEGG: lxx:Lxx16160 0.92 dapB; dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase; Psort location: Cytoplasmic, score: 8.96.
 
     0.769
EKE96495.1
SagB-type dehydrogenase domain protein; KEGG: tth:TTC1977 0.00078 glucose-1-phosphate adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.732
EKE96799.1
Transposase; KEGG: dre:445279 0.79 harbi1; harbinger transposase derived 1; Psort location: Cytoplasmic, score: 8.96.
  
    0.652
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.588
EKE96494.1
YcaO-like family protein; KEGG: fgr:FG00749.1 0.98 hypothetical protein; K01868 threonyl-tRNA synthetase.
  
     0.581
EKE96802.1
Glycosyl hydrolase, family 18; KEGG: edi:EDI_120190 1.4e-11 chitotriosidase-1 precursor; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 
 0.553
EKF00810.1
Hypothetical protein; KEGG: cak:Caul_2776 0.45 anthranilate synthase component II; K01658 anthranilate synthase component II.
       0.534
EKF00811.1
Hypothetical protein; KEGG: ava:Ava_1995 0.018 serine/threonine protein kinase K00908.
       0.533
EKF01733.1
SCP-like extracellular protein; KEGG: psp:PSPPH_5061 1.3e-17 poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3) K01795; Psort location: Extracellular, score: 10.00.
  
 
 0.525
EKF04094.1
Putative DNA and RNA helicase, superfamily I; KEGG: lsp:Bsph_0887 8.0e-98 putative ATP-dependent helicase.
  
     0.514
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.