STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF00546.1KEGG: npu:Npun_F2773 1.1e-147 glycoside hydrolase family 3 protein K01207; Psort location: Cytoplasmic, score: 9.97. (365 aa)    
Predicted Functional Partners:
anmK
Putative anhydro-N-acetylmuramic acid; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
  
 0.740
pepA
Cytosol aminopeptidase family, catalytic domain protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
    
 0.695
EKF01139.1
D-Ala-D-Ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
   
  0.643
EKF06050.1
Glycosyl hydrolase, family 31; KEGG: ana:alr4773 0. alpha-glucosidase; K01187 alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
 0.603
EKF00722.1
Hypothetical protein; KEGG: cyc:PCC7424_1902 4.5e-36 alpha-glucosidase.
    
 0.603
EKF03586.1
Glycosyl hydrolase family 10; KEGG: cyn:Cyan7425_1132 5.5e-96 endo-1,4-beta-xylanase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.583
murQ
Sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.582
EKF02310.1
Shikimate kinase; KEGG: npu:Npun_R5331 1.9e-61 carbohydrate kinase K00851.
 
   
  0.570
rlpA-2
Lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
     0.567
EKF00935.1
Putative N-acetylglucosamine kinase; KEGG: ava:Ava_2007 5.1e-109 ATPase, BadF/BadG/BcrA/BcrD type K00884.
 
    0.528
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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