STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF00727.1RND transporter; Hydrophobe/Amphiphile Efflux-1 and Heavy Metal Efflux families, permease protein; KEGG: dat:HRM2_00450 1.1e-27 rndA; RndA K07787. (937 aa)    
Predicted Functional Partners:
EKF01738.1
Type I secretion membrane fusion protein, HlyD family; KEGG: npu:Npun_F2138 3.5e-07 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.877
EKF03933.1
Efflux transporter, RND family, MFP subunit; KEGG: dme:Dmel_CG34422 0.0049 CG34422 gene product from transcript CG34422-RA; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.874
EKF02537.1
Efflux transporter, RND family, MFP subunit; KEGG: aag:AaeL_AAEL001440 0.00071 E1a binding protein P400; K11320 E1A-binding protein p400; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.840
EKF05138.1
Efflux transporter, RND family, MFP subunit; KEGG: mbr:MONBRDRAFT_37886 2.1e-05 hypothetical protein; K10643 CCR4-NOT transcription complex subunit 4; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.838
EKF05862.1
Efflux transporter, RND family, MFP subunit; KEGG: npu:Npun_F2138 8.9e-14 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.825
EKF04677.1
Putative outer membrane efflux protein; KEGG: sce:YIR019C 7.8e-07 MUC1; GPI-anchored cell surface glycoprotein (flocculin) required for pseudohyphal formation, invasive growth, flocculation, and biofilms; transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p) K01178; Psort location: OuterMembrane, score: 9.95.
 
 
 0.799
EKF00728.1
Hopanoid-associated sugar epimerase; KEGG: npu:Npun_F5286 1.1e-143 NAD-dependent epimerase/dehydratase.
       0.773
EKF05763.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 0.00045 fadD; long-chain-fatty-acid--CoA ligase K12340; Psort location: OuterMembrane, score: 10.00.
   
 0.766
EKF01570.1
Hypothetical protein; KEGG: pde:Pden_2483 0.37 cytochrome c oxidase, subunit I; K04561 nitric-oxide reductase, cytochrome b-containing subunit I; Psort location: CytoplasmicMembrane, score: 9.86.
   
 0.766
EKF00510.1
Hypothetical protein; KEGG: rhi:NGR_c02540 0.18 cheA2; chemotaxis protein CheA K03407; Psort location: CytoplasmicMembrane, score: 9.86.
   
 0.766
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.