STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF00738.1Putative DNA-binding protein; KEGG: fph:Fphi_0354 0.39 soluble lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase. (460 aa)    
Predicted Functional Partners:
EKF00739.1
Hypothetical protein; KEGG: vfi:VF_1056 0.97 phosphoglucomutase K01840.
       0.773
EKF00732.1
Hypothetical protein; KEGG: spv:SPH_0864 0.993 holA; DNA polymerase III subunit delta K02340.
 
     0.646
EKE96540.1
Conjugation protein TrwB; KEGG: btr:Btr_0809 0.27 dnaB; replicative DNA helicase; K02314 replicative DNA helicase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
   0.637
EKF05785.1
Putative CRISPR-associated protein; KEGG: mea:Mex_1p1833 0.24 PAS/PAC sensor signal transduction histidine kinase (fragment).
  
     0.575
EKF00737.1
Hypothetical protein; KEGG: mag:amb4107 0.95 leucyl aminopeptidase; K01255 leucyl aminopeptidase.
       0.564
EKE98080.1
Conjugation protein, putative TraG family; KEGG: cpc:Cpar_0073 0.97 ATP-dependent metalloprotease FtsH K03798.
    
   0.554
EKE98062.1
KEGG: xtr:448246 0.68 MGC88972 protein; K00858 NAD+ kinase; Psort location: CytoplasmicMembrane, score: 9.82.
    
   0.554
EKE97327.1
Hypothetical protein; KEGG: aap:NT05HA_1177 0.89 MTA/SAH nucleosidase; K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase; Psort location: CytoplasmicMembrane, score: 9.82.
    
   0.554
EKE99549.1
Conjugation protein TraG; KEGG: tdn:Suden_0610 0.41 DEAD/DEAH box helicase-like; K11927 ATP-dependent RNA helicase RhlE.
    
   0.554
EKE99539.1
Hypothetical protein; KEGG: pmh:P9215_08911 0.51 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase K01814.
  
     0.553
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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