STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF00457.1Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 4.3e-14 DNA polymerase family B containing protein K02350. (236 aa)    
Predicted Functional Partners:
EKF04570.1
Putative heat shock protein 70 DnaK; KEGG: ava:Ava_0434 2.4e-54 serine/threonine protein kinase K00908; Psort location: Cytoplasmic, score: 9.97; Belongs to the heat shock protein 70 family.
   
  0.931
EKF00403.1
Putative heat shock protein DnaJ; KEGG: ava:Ava_4855 2.0e-57 WD-40 repeat-containing serine/threonin protein kinase K00908; Psort location: CytoplasmicMembrane, score: 9.50.
    
  0.918
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
  0.802
EKF01984.1
KEGG: cyb:CYB_1515 5.6e-38 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.777
EKF00202.1
WD domain, G-beta repeat protein; KEGG: ava:Ava_2851 6.5e-45 WD-40 repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 8.96.
    
  0.774
EKF02835.1
KEGG: cyb:CYB_1515 2.8e-88 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
  
     0.773
EKE99305.1
Tetratricopeptide repeat protein; KEGG: rba:RB12434 4.1e-15 ogt; O-GlcNAc transferase K00754.
  
     0.772
EKF04619.1
KEGG: cyb:CYB_1515 1.7e-33 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
  
     0.769
EKE97140.1
Chaperone HtpG; KEGG: eci:UTI89_C0501 6.3e-63 htpG; heat shock protein 90 K04079.
   
  0.757
EKF02752.1
KEGG: cyb:CYB_1515 4.3e-35 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Extracellular, score: 9.64.
  
 
   0.755
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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