STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF00244.1Hypothetical protein; KEGG: cac:CAC0418 0.34 HAD family phosphatase; K01091 phosphoglycolate phosphatase. (70 aa)    
Predicted Functional Partners:
EKE97789.1
Putative beta-lactamase-fold exonuclease; KEGG: dme:Dmel_CG1972 6.4e-13 CG1972 gene product from transcript CG1972-RA; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.922
EKF00243.1
Hypothetical protein; KEGG: cyn:Cyan7425_2208 5.2e-68 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.913
EKF03236.1
Putative helicase; KEGG: hsl:OE8016F 8.1e-51 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
    
  0.887
EKF01001.1
Hypothetical protein; KEGG: cgt:cgR_1633 0.080 phosphoenolpyruvate carboxylase K01595.
    
  0.887
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
 0.886
EKF01304.1
Helicase; KEGG: lsp:Bsph_0793 1.9e-08 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
    
  0.861
EKF06188.1
Hypothetical protein; KEGG: rha:RHA1_ro02535 0.77 rubA; alkene monooxygenase rubredoxin K00496; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
  0.825
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
  0.813
EKE98277.1
KEGG: cyb:CYB_1515 1.2e-08 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
    
  0.785
EKF01145.1
KEGG: cyb:CYB_1515 9.8e-12 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
    
  0.785
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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