STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE99881.1Cyclic nucleotide-binding domain protein; KEGG: afw:Anae109_3360 0.00022 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384; Psort location: Cytoplasmic, score: 8.96. (352 aa)    
Predicted Functional Partners:
EKF04056.1
Sensor histidine kinase; KEGG: npu:Npun_R0896 0. multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.918
EKE99434.1
Sensor histidine kinase; KEGG: cyt:cce_2246 5.7e-101 cyaA; adenylate cyclase; K01768 adenylate cyclase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.849
EKF05079.1
GMP synthase; KEGG: ava:Ava_1294 0. glutamate synthase (ferredoxin) K00284.
    
 0.845
EKF05815.1
Channel protein, MIP family; KEGG: hiq:CGSHiGG_06740 8.6e-07 glpQ; glycerophosphodiester phosphodiesterase K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.840
EKF00301.1
HAMP domain protein; KEGG: ava:Ava_4696 0. GAF sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.829
EKF03960.1
Catabolite activator protein; KEGG: eci:UTI89_C3860 1.4e-12 crp; cAMP-regulatory protein K10914.
  
  
  0.808
EKE98708.1
Hypothetical protein; KEGG: abb:ABBFA_001887 0.48 oligopeptidase A.
    
 
 0.800
EKE97400.1
KEGG: ava:Ava_3046 0. ferredoxin (flavodoxin) oxidoreductase K03737.
    
 0.797
EKF00361.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
 0.797
EKE98746.1
Response regulator; KEGG: ava:Ava_2420 1.9e-156 PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.793
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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