STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE99564.1Hypothetical protein; KEGG: sew:SeSA_A2706 0.10 tal; transaldolase A K00616. (339 aa)    
Predicted Functional Partners:
EKE99563.1
Hypothetical protein; KEGG: spo:SPBC1105.16c 0.96 rpr2; RNase P subunit Rpr2 (predicted); K03540 ribonuclease P subunit RPR2.
       0.773
EKE99565.1
Hypothetical protein; KEGG: ssu:SSU05_1020 0.73 NTP pyrophosphohydrolase including oxidative damage repair enzymes; K03574 7,8-dihydro-8-oxoguanine triphosphatase.
       0.773
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.685
EKE98551.1
Hypothetical protein; KEGG: fps:FP1866 0.62 relA; GTP diphosphokinase; Psort location: CytoplasmicMembrane, score: 9.82.
    
 
 0.619
EKE97166.1
Hypothetical protein; KEGG: mlo:mlr0839 0.43 DNA topoisomerase I K03168.
    
 
 0.619
EKF05819.1
Oxidoreductase NAD-binding domain protein; KEGG: npu:Npun_F2215 2.6e-176 oxidoreductase FAD/NAD(P)-binding subunit; Psort location: Cytoplasmic, score: 9.26.
    
   0.549
EKE99562.1
KEGG: xfa:XF0928 0.070 hypothetical protein; K03500 ribosomal RNA small subunit methyltransferase B.
       0.546
EKE99566.1
Hypothetical protein; KEGG: rpf:Rpic12D_2435 0.78 DNA-3-methyladenine glycosylase II K01247.
       0.482
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.