STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB32480.1CRISPR-associated RAMP Cmr4 family protein family protein. (297 aa)    
Predicted Functional Partners:
APB32478.1
Uncharacterized protein Putative to be involved in DNA repair (RAMP superfamily).
 
 
 
 0.998
APB32924.1
CRISPR-associated RAMP family protein.
 
 
 
 0.995
APB32483.1
Putative hydrolase of the HD superfamily (permuted catalytic motifs).
 
 
 
 0.980
APB32932.1
CRISPR-associated RAMP Crm2 family protein.
  
 
 
 0.918
APB32942.1
Putative hydrolase of the HD superfamily (permuted catalytic motifs).
  
 
 
 0.808
APB32479.1
Hypothetical protein.
       0.775
APB32481.1
CRISPR-associated protein.
       0.775
APB32482.1
Uncharacterized protein conserved in cyanobacteria.
       0.773
cas1-1
CRISPR-associated Cas1 family protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
     0.764
cas1
CRISPR-associated protein Cas1, putative; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
     0.744
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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