STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiO-2ABC transporter-like protein. (210 aa)    
Predicted Functional Partners:
cbiQ
Cobalt transport protein.
 
 0.987
bioY
BioY family.
   
 0.935
APB32768.1
Hypothetical protein.
       0.773
APB32569.1
Hypothetical protein.
 
     0.705
cbiGH-cobJ
precorrin-3B C17-methyltransferase.
  
 
 0.682
cbiO-1
Polyamine-transporting ATPase.
  
  
 
0.661
APB34361.1
PRC-barrel domain-containing protein.
  
     0.586
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
 
    0.581
APB33643.1
ABC transporter; Belongs to the ABC transporter superfamily.
  
 
0.578
APB33895.1
ATPase; Belongs to the ABC transporter superfamily.
  
 
0.578
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.