STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB32929.1CRISPR-associated RAMP Cmr4 family protein family protein. (280 aa)    
Predicted Functional Partners:
APB32924.1
CRISPR-associated RAMP family protein.
 
 
 
 0.998
APB32478.1
Uncharacterized protein Putative to be involved in DNA repair (RAMP superfamily).
 
 
 
 0.995
APB32932.1
CRISPR-associated RAMP Crm2 family protein.
 
 
 
 0.981
APB32483.1
Putative hydrolase of the HD superfamily (permuted catalytic motifs).
  
 
 
 0.919
APB32926.1
Hypothetical protein.
       0.775
APB32930.1
Hypothetical protein.
       0.775
APB32923.1
Hypothetical protein.
       0.773
APB32925.1
Uncharacterized protein conserved in cyanobacteria.
       0.773
APB32927.1
Uncharacterized protein conserved in cyanobacteria.
       0.773
APB32928.1
Uncharacterized protein conserved in cyanobacteria.
       0.773
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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