STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB33038.1NADPH-dependent FMN reductase. (193 aa)    
Predicted Functional Partners:
APB32378.1
Trehalose-phosphatase.
   
    0.814
APB34045.1
Flavin reductase like domain protein.
    
 0.763
APB34274.1
Putative flavoprotein.
    
 0.763
APB33104.1
Hypothetical protein.
   
    0.685
APB35230.1
Hypothetical protein.
   
  
 0.574
APB33183.1
Ferritin Dps family protein; Belongs to the Dps family.
   
  
 0.553
dps
DNA starvation/stationary phase protection protein Dps; Belongs to the Dps family.
   
  
 0.553
APB33037.1
Hypothetical protein.
       0.500
cobA-hemD
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
     
 0.402
trxB-2
Thioredoxin reductase.
     
 0.401
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
Server load: low (24%) [HD]