STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB33215.1Ammonium transporter. (521 aa)    
Predicted Functional Partners:
glnB
Nitrogen regulatory protein P-II (GlnB, GlnK); Belongs to the P(II) protein family.
 0.997
APB32869.1
Hypothetical protein.
  
 0.911
APB32837.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
   
  0.903
APB32360.1
PAS fold family.
 
    
 0.848
APB34528.1
Sensory box histidine kinase/response regulator.
  
 0.842
APB33754.1
Conserved region in glutamate synthase family.
 
  
 0.825
APB32465.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
      0.762
APB35000.1
Two-component hybrid sensor and regulator histidine kinase.
 
  
 0.713
APB32753.1
Adenylate/guanylate cyclase.
 
   
 0.597
APB34768.1
Serine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF and PAS/PAC sensor.
    
 0.564
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.