STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB33462.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
APB34717.1
Heat shock protein Hsp90.
    
 0.992
prkB
Phosphoribulokinase.
    
 0.940
APB34829.1
Dual specificity protein phosphatase.
    
 0.932
APB32952.1
CRISPR-associated Csx3 family protein.
   
 0.931
APB33701.1
GTPase SAR1 and related small G proteins.
   
 0.931
APB34454.1
GTPase SAR1 and related small G proteins.
   
 0.931
APB35311.1
Short chain dehydrogenase.
    
 0.913
APB33301.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein.
    
 0.852
APB33309.1
Adenylate cyclase.
    
 0.835
APB33348.1
Protein serine/threonine phosphatase.
   
 0.827
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
Server load: low (10%) [HD]