STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpsBMannose-1-phosphate guanylyltransferase. (344 aa)    
Predicted Functional Partners:
manA
Mannose-6-phosphate isomerase type II.
  
  0.989
APB34477.1
Nucleotidyl transferase.
  
 
 0.889
APB34012.1
Putative LPS sugar transferase.
  
 
 0.803
ugd
Nucleotide sugar dehydrogenase.
 
 
 0.772
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.740
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.720
APB34911.1
Capsular polysaccharide biosynthesis protein.
  
 
 0.715
APB33518.1
Hypothetical protein.
       0.682
APB32973.1
Nucleotidyl transferase.
  
 
 0.670
fbp
Fructose-1,6-bisphosphatase class 1; Belongs to the FBPase class 1 family.
   
 0.632
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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