STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB33581.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
APB33580.1
Galactokinase.
 
     0.870
APB32994.1
Hypothetical protein.
  
     0.763
APB32909.1
Site-specific recombinase, DNA invertase Pin homologs.
  
     0.761
APB34964.1
Hypothetical protein.
  
     0.748
APB33016.1
Hypothetical protein.
  
     0.718
APB32723.1
Heat shock protein DnaJ domain-containing protein.
  
     0.714
APB34940.1
Protein of unknown function, DUF1830.
  
     0.710
APB33278.1
Hypothetical protein.
  
     0.701
APB35273.1
Hypothetical protein.
  
     0.683
APB33269.1
Hypothetical protein.
  
     0.674
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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