STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB34217.1Putative glycosyltransferase family 8 protein. (302 aa)    
Predicted Functional Partners:
APB34218.1
Hypothetical protein.
       0.793
APB33653.1
Glycosyl transferase, family 9.
  
 
 0.670
ureJ-2
HupE/UreJ protein.
       0.642
APB34220.1
Crp/FNR family transcriptional regulator.
       0.564
APB33612.1
Lipid A core, O-antigen ligase family enzyme.
  
 
 0.554
APB34963.1
O-antigen polymerase.
  
 
 0.554
metF
Putative methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
    0.533
APB34504.1
Hypothetical protein.
  
 
 0.481
mreB
Rod shape-determining protein MreB.
       0.422
pstS-3
Phosphate ABC transporter, periplasmic phosphate-binding protein; Belongs to the PstS family.
       0.402
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.