STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB34223.1PEP-CTERM putative exosortase interaction domain protein. (177 aa)    
Predicted Functional Partners:
mreC
Rod shape-determining protein MreC.
  
 
 0.990
minC
Septum formation inhibitor MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.885
mreB
Rod shape-determining protein MreB.
  
  
 0.829
APB33365.1
Hypothetical protein.
  
     0.773
APB35074.1
Hypothetical protein.
  
     0.763
APB34369.1
Hypothetical protein.
  
     0.758
pilN
Fimbrial assembly protein PilN.
 
    0.754
APB34512.1
Hypothetical protein.
  
     0.753
APB33397.1
Hypothetical protein.
  
     0.750
APB33806.1
Hypothetical protein.
  
     0.750
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.