STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB34255.1Plasmid stabilization system protein. (103 aa)    
Predicted Functional Partners:
APB34254.1
Hypothetical protein.
  
 
 0.955
APB32426.1
Hypothetical protein.
  
 
 0.846
APB34256.1
Hypothetical protein.
       0.773
APB34253.1
Uncharacterized protein conserved in cyanobacteria.
       0.530
APB34677.1
Uncharacterized protein conserved in cyanobacteria.
  
     0.456
APB35027.1
Filamentous hemagglutinin family outer membrane protein, N-term part.
  
     0.418
APB33055.1
Hypothetical protein.
  
     0.413
APB32597.1
Type II restriction enzyme, methylase subunits (N-terminus); Coding region disrupted by sequencing gap.
  
     0.407
APB32925.1
Uncharacterized protein conserved in cyanobacteria.
  
     0.401
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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