STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB34665.1Peptidase M48 Ste24p. (763 aa)    
Predicted Functional Partners:
APB33244.1
FHA domain-containing protein.
  
     0.763
APB35081.1
Hypothetical protein.
  
     0.747
APB34521.1
Hypothetical protein.
 
    0.744
APB34178.1
Hypothetical protein.
  
    0.735
APB34512.1
Hypothetical protein.
  
     0.735
APB34370.1
Hypothetical protein.
  
     0.734
APB34620.1
Hypothetical protein.
  
     0.733
APB33327.1
Hypothetical protein.
  
     0.723
APB33605.1
Dolichyl-phosphate-mannose--protein O-mannosyl transferase.
  
     0.704
APB35163.1
Hypothetical protein.
  
     0.704
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.