STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcsACellulose synthase (UDP-forming). (706 aa)    
Predicted Functional Partners:
APB32360.1
PAS fold family.
  
 
 0.848
APB32378.1
Trehalose-phosphatase.
    
  0.708
APB35311.1
Short chain dehydrogenase.
    
 0.701
APB34239.1
Hypothetical protein.
 
     0.695
APB32362.1
Polysaccharide deacetylase.
  
 
  0.673
APB34528.1
Sensory box histidine kinase/response regulator.
  
  
 0.603
APB34730.1
Hypothetical protein.
       0.601
APB32463.1
NAD dependent epimerase/dehydratase family.
   
 
  0.565
rfbG
CDP-glucose 4,6-dehydratase.
   
 
  0.565
APB34731.1
Hypothetical protein.
 
     0.562
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.