STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAU_0040Type III restriction modification system endonuclease subunit, Res. (808 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 
  0.995
rpoB
DNA-dependent RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.993
polA
DNA polymerase I: 5'-3' exonuclease domain protein.
  
 0.990
MAU_0050
Type III restriction modification system N6-adenine DNA methyltransferase subunit, Mod.
 
     0.921
rpoC
DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.869
hit
HIT-like protein.
  
 
  0.804
dnaN
DNA polymerase III beta chain.
    
  0.722
lip
Esterase/lipase.
 
     0.687
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 
 0.648
MAU_5050
Hypothetical protein.
 
     0.644
Your Current Organism:
Mycoplasma auris
NCBI taxonomy Id: 1188233
Other names: M. auris 15026, Mycoplasma auris 15026
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.