STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAU_0190DNA polymerase IV (DinB). (417 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III beta chain.
  
 0.998
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.978
polA
DNA polymerase I: 5'-3' exonuclease domain protein.
  
 0.950
nadD
Putative nicotinate-nucleotide adenylyl transferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
    0.857
nifS
Aminotransferase protein S (nitrogen fixation protein NifS).
  
  
 0.838
nusB
N utilization substance protein B, NusB-like protein.
     
 0.837
nifU
Aminotransferase protein U (nitrogen fixation protein NifU).
     
 0.834
tlyA
Hemolysin A.
       0.827
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
 
 0.815
MAU_0240
Hypothetical protein, putative metallophosphoesterase.
       0.787
Your Current Organism:
Mycoplasma auris
NCBI taxonomy Id: 1188233
Other names: M. auris 15026, Mycoplasma auris 15026
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