MAU_6050 protein (Mycoplasma auris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MAU_6050

Hypothetical protein, predicted transmembrane protein, putative MatE family efflux protein. (576 aa)

Predicted Functional Partners:

MAU_6070

0.782

MAU_0810

0.778

MAU_2060

0.770

MAU_2090

0.765

MAU_3840

0.754

MAU_0850

0.752

MAU_0520

0.745

MAU_5840

0.734

MAU_5600

0.725

MAU_3600

0.693

Your Current Organism:

Mycoplasma auris

NCBI taxonomy Id: 1188233
Other names: M. auris 15026, Mycoplasma auris 15026

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MAU_0520	MAU_0810	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	0.775
MAU_0520	MAU_0850	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	Hypothetical protein, putative Spermidine/putrescine ABC transporter substrate binding protein (potD).	0.776
MAU_0520	MAU_2060	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	ABC transporter permease protein.	0.750
MAU_0520	MAU_2090	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	Hypothetical protein, predicted transmembrane protein.	0.766
MAU_0520	MAU_3600	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	Hypothetical protein, predicted transmembrane protein.	0.743
MAU_0520	MAU_3840	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	Hypothetical protein, predicted lipoprotein.	0.682
MAU_0520	MAU_5840	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	Hypothetical protein, putative transmembrane protein.	0.755
MAU_0520	MAU_6050	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	Hypothetical protein, predicted transmembrane protein, putative MatE family efflux protein.	0.745
MAU_0520	MAU_6070	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	Hypothetical protein.	0.772
MAU_0810	MAU_0520	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	0.775
MAU_0810	MAU_0850	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, putative Spermidine/putrescine ABC transporter substrate binding protein (potD).	0.984
MAU_0810	MAU_2060	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	ABC transporter permease protein.	0.798
MAU_0810	MAU_2090	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, predicted transmembrane protein.	0.775
MAU_0810	MAU_3600	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, predicted transmembrane protein.	0.776
MAU_0810	MAU_3840	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, predicted lipoprotein.	0.774
MAU_0810	MAU_5600	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, predicted transmembrane protein.	0.739
MAU_0810	MAU_5840	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, putative transmembrane protein.	0.782
MAU_0810	MAU_6050	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, predicted transmembrane protein, putative MatE family efflux protein.	0.778
MAU_0810	MAU_6070	Hypothetical protein, putative spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein.	0.779
MAU_0850	MAU_0520	Hypothetical protein, putative Spermidine/putrescine ABC transporter substrate binding protein (potD).	Hypothetical protein, putativecarbohydrate kinase, predicted transmembrane protein.	0.776