STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepPXaa-Pro aminopeptidase. (347 aa)    
Predicted Functional Partners:
rpmG2
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.767
folD
Methylenetetrahydrofolate dehydrogenase/cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
      0.649
pepO
Endopeptidase O.
   
 
 0.643
metS
Methionyl-tRNA synthetase (Methionine-tRNAligase, MetRS).
   
 
 0.610
topA
DNA topoisomerase I.
  
  
 0.592
nox
NADH oxidase.
    
 0.568
pdhD-2
Dihydrolipoamide dehydrogenase.
  
 
 0.558
polA
DNA polymerase I, 5'-3' exonuclease.
  
 
 0.531
pepF
Oligoendopeptidase F.
     
 0.510
trxB
Thioredoxin reductase.
    
  0.501
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.