STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
holAPutative DNA polymerase III, delta subunit, HolA. (323 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III beta chain.
 
 
 0.999
dnaE
DNA polymerase III alpha subunit.
  
 0.999
dnaX
DNA polymerase III subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 0.998
dnaH
DNA polymerase III subunit.
   
 0.998
polC
DNA polymerase III polC-type.
    
 0.980
dexB
Glucan 1,6-alpha-glucosidase.
 
     0.862
polA
DNA polymerase I, 5'-3' exonuclease.
     
 0.823
topA
DNA topoisomerase I.
     
 0.726
pgsA
CDP-diacylglycerol-glycerol-3-phosphate3- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.641
MALK_0290
Hypothetical protein, predicted transmembrane protein.
       0.597
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.