STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALK_0340Hypothetical protein, predicted transmembrane protein. (457 aa)    
Predicted Functional Partners:
MALK_0330
Hypothetical protein, predicted transmembrane protein.
 
  
 0.883
lspA
Lipoprotein signal peptidase.
 
     0.715
secD
Protein-export membrane protein.
  
     0.713
MALK_5840
Hypothetical protein, predicted lipoprotein.
 
     0.709
MALK_4540
Hypothetical protein, predicted lipoprotein.
 
  
 0.698
MALK_4610
Hypothetical protein, predicted membrane nuclease.
 
     0.672
MALK_0200
Hypothetical protein.
 
     0.668
MALK_4340
Hypothetical protein.
 
     0.608
MALK_4300
Hypothetical protein.
 
     0.576
MALK_2850
ABC transporter permease protein.
 
     0.574
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.