STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALK_1520Hypothetical protein, predicted hydrolase of the HAD family. (268 aa)    
Predicted Functional Partners:
ribF
Riboflavin biosynthesis protein.
   
  0.853
truB
tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family.
  
    0.832
MALK_1490
Hypothetical protein, predicted lipoprotein.
       0.536
MALK_1500
Hypothetical protein, predicted lipoprotein.
       0.536
ywpJ
Hypothetical protein, putative COF family HAD hydrolase.
  
     0.460
MALK_1480
Hypothetical protein.
  
    0.439
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
  
   0.430
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.