STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metSMethionyl-tRNA synthetase (Methionine-tRNAligase, MetRS). (520 aa)    
Predicted Functional Partners:
pheT
Phenylalanyl-tRNA synthetase beta chain (PheT).
  
 
 0.999
fmt
Methionyl-tRNA formyltransferase.
  
 
 0.998
leuS
Leucyl-tRNA synthetase.
  
 0.997
pheS
Phenylalanyl-tRNA synthetase alpha subunit (PheS); Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
  
 0.997
def
Peptide deformylase (Polypeptide deformylase).
  
 
 0.996
gltX
Glutamyl-tRNA synthetase.
  
 0.994
ileS
Isoleucyl-tRNA synthetase.
  
 0.990
asnS
Asparaginyl-tRNA-synthetase.
  
 0.990
argS
Arginyl-tRNA synthetase.
  
 0.989
proS
Prolyl-tRNA synthetase.
  
 0.982
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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