STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysSLysyl-tRNA synthetase. (488 aa)    
Predicted Functional Partners:
metS
Methionyl-tRNA synthetase (Methionine-tRNAligase, MetRS).
  
 0.981
gltX
Glutamyl-tRNA synthetase.
  
 0.976
proS
Prolyl-tRNA synthetase.
  
 0.945
argS
Arginyl-tRNA synthetase.
  
 0.933
leuS
Leucyl-tRNA synthetase.
  
 0.931
ileS
Isoleucyl-tRNA synthetase.
  
 0.930
asnS
Asparaginyl-tRNA-synthetase.
  
0.883
pheT
Phenylalanyl-tRNA synthetase beta chain (PheT).
  
  
 0.878
rpsB
30S ribosomal protein S2.
  
 
 0.809
hit
HIT-like protein.
   
 
 0.729
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.