STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serSSeryl-tRNA synthetase. (421 aa)    
Predicted Functional Partners:
acpP
Putative acyl carrier protein.
   
 
 0.978
topA
DNA topoisomerase I.
     
 0.823
trmB
tRNA (guanine-N(7)-)-methyltransferase.
   
   0.812
metS
Methionyl-tRNA synthetase (Methionine-tRNAligase, MetRS).
  
  
 0.747
argS
Arginyl-tRNA synthetase.
  
 
 0.725
hisS
Histidyl-tRNA synthetase.
  
 
 0.672
pheT
Phenylalanyl-tRNA synthetase beta chain (PheT).
  
  
 0.669
tmk
Thymidylate kinase (dTMP kinase).
 
    0.668
tilS
tRNA(Ile)-lysidine synthase.
     
 0.663
trpS
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.663
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.