STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAPhosphatidate cytidylyltransferase. (331 aa)    
Predicted Functional Partners:
plsC
1-acyl-SN-glycerol-3-phosphate acyltransferase.
    
 0.989
pgsA
CDP-diacylglycerol-glycerol-3-phosphate3- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.982
polC
DNA polymerase III polC-type.
       0.789
pyrH
Uridylate kinase smbA.
  
  
 0.745
frr
Ribosome recycling factor (Ribosome releasing factor).
  
  
 0.713
secD
Protein-export membrane protein.
 
    0.550
MALK_4360
Hypothetical protein.
    
  0.464
pgi
Glucose-6-phosphate isomerase (GPI).
     
 0.458
tsf
Elongation factor Ts (ET-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
 
  
 0.443
MALK_4540
Hypothetical protein, predicted lipoprotein.
 
     0.431
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.