STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALK_4780ABC transporter, permease protein. (612 aa)    
Predicted Functional Partners:
abc
ABC transporter, ATP-binding protein.
 
 
 0.986
MALK_4750
Hypothetical protein, predicted lipoprotein.
 
     0.959
MALK_4740
Hypothetical protein, predicted lipoprotein.
       0.827
MALK_4760
Hypothetical protein, predicted lipoprotein.
       0.827
MALK_1310
Hypothetical protein, predicted transmembrane protein.
  
     0.771
MALK_1330
Hypothetical protein, putative F1-ATPase, gamma subunit.
  
     0.754
MALK_2200
Hypothetical protein, predicted transmembrane protein.
 
     0.687
MALK_2250
Hypothetical protein, predicted transmembrane protein.
 
     0.679
MALK_2190
Hypothetical protein, predicted lipoprotein.
  
     0.674
MALK_2210
Hypothetical protein, predicted lipoprotein.
  
     0.668
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.