STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALK_4880Hypothetical protein, putative metallophosphoesterase. (268 aa)    
Predicted Functional Partners:
nadD
Putative nicotinate-nucleotide adenylyltransferase.
  
    0.831
tlyA
Hemolysin A.
       0.803
nusB
Transcription termination factor NusB.
       0.794
dinP
DNA polymerase IV (DinB).
       0.788
nifU
Aminotransferase protein U (Nitrogen fixation protein NifU).
       0.785
nifS
Aminotransferase protein S (Nitrogen fixation protein NifS).
       0.785
folD
Methylenetetrahydrofolate dehydrogenase/cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
      0.762
recA
Recombinase A.
       0.666
pheT
Phenylalanyl-tRNA synthetase beta chain (PheT).
  
    0.578
pheS
Phenylalanyl-tRNA synthetase alpha subunit (PheS); Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
  
    0.493
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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