STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgs1_2ATPase, AAA family. (401 aa)    
Predicted Functional Partners:
pheS
Phenylalanyl-tRNA synthetase alpha subunit (PheS); Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
     
 0.885
pheT
Phenylalanyl-tRNA synthetase beta chain (PheT).
  
    0.833
polA
DNA polymerase I, 5'-3' exonuclease.
  
  
 0.746
recA
Recombinase A.
  
 
 0.707
dnaN
DNA polymerase III beta chain.
   
   0.647
nadD
Putative nicotinate-nucleotide adenylyltransferase.
   
   0.624
dinP
DNA polymerase IV (DinB).
  
 
 0.605
nusB
Transcription termination factor NusB.
  
    0.515
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.489
nifU
Aminotransferase protein U (Nitrogen fixation protein NifU).
       0.479
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.