STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnC-2Phosphonate ABC transporter, ATP-binding protein. (303 aa)    
Predicted Functional Partners:
phnB-2
Alkylphosphonate ABC transporter, permease protein.
 
 0.995
phnB-1
ABC transporter permease protein.
 
 
 0.979
MALK_5430
Hypothetical protein, predicted lipoprotein.
 
 
 0.974
phnC-1
Phosphonates import ATP-binding protein phnC.
  
  
 
0.968
phnD
P37-like ABC transporter substrate-binding lipoprotein.
    
  0.900
oppD
Oligopeptide transport ATP-binding protein; Overlaps another CDS with the same product name.
 
     
0.898
dhh
Phosphoesterase DHH family protein.
       0.776
dnaI
Hypothetical protein, putative primosome component.
       0.431
MALK_5410
Hypothetical protein.
       0.414
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.