STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALK_6100Hypothetical protein, predicted metalloprotease. (574 aa)    
Predicted Functional Partners:
secD
Protein-export membrane protein.
 
  
  0.864
MALK_5240
Hypothetical protein, predicted lipoprotein.
 
     0.740
MALK_5220
Hypothetical protein, predicted lipoprotein.
 
     0.729
MALK_0200
Hypothetical protein.
 
     0.706
MALK_4370
ABC transporter ATP-binding protein, putative bacteriocin exporter and processing endoprotease C39.
  
    0.700
ftsH_1
AAA family ATPase.
    
  0.696
oppA
Oligopeptide ABC transporter substrate-binding protein.
  
     0.592
hlyC
Hemolysin C.
 
    0.543
atpE
ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
  0.540
MALK_5630
Hypothetical protein, putative peptidase S8/S53.
    
 0.538
Your Current Organism:
Mycoplasma alkalescens
NCBI taxonomy Id: 1188234
Other names: M. alkalescens 14918, Mycoplasma alkalescens 14918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.