STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppF-2Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (791 aa)    
Predicted Functional Partners:
oppC-2
Oligopeptide ABC transporter, permease protein.
 
 0.995
oppB-2
Oligopeptide ABC transporter, permease protein.
 
 0.995
MBVG_1170
Hypothetical protein, predicted lipoprotein.
 
    0.935
oppD-2
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.921
MBVG_1820
Hypothetical protein.
 
 
  0.919
oppC-3
Oligopeptide ABC transporter, permease protein.
 
 0.918
oppF-3
Oligopeptide ABC transporter, ATP-binding protein (OppF); Belongs to the ABC transporter superfamily.
 
  
 
0.918
oppB-3
Oligopeptide ABC transporter, permease protein.
 
 0.901
oppC-1
Oligopeptide ABC transporter, permease protein.
 
 
 0.900
cbiQ
Cobalt ABC transporter permease protein.
  
 
 0.866
Your Current Organism:
Mycoplasma bovigenitalium
NCBI taxonomy Id: 1188235
Other names: M. bovigenitalium 51080, Mycoplasma bovigenitalium 51080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.