STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBVG_1660Hypothetical protein, predicted transmembrane protein; Potentially truncated in N-terminal. (287 aa)    
Predicted Functional Partners:
nusB
Transcription termination factor.
 
     0.896
MBVG_2450
Hypothetical protein, predicted transmembrane protein.
  
     0.772
lsp
Lipoprotein signal peptidase (Spase II); This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
     0.771
MBVG_6140
ABC transporter permease protein.
  
     0.769
MBVG_7130
Hypothetical protein, DUF2779 family.
  
     0.769
MBVG_7120
Hypothetical protein, putative YaqJ super family.
  
     0.745
MBVG_3700
Hypothetical protein, putative dephospho-CoA kinase.
  
     0.744
MBVG_3520
Hypothetical protein, predicted trasmembrane protein.
  
     0.738
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
     0.719
secD
Protein-export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
     0.719
Your Current Organism:
Mycoplasma bovigenitalium
NCBI taxonomy Id: 1188235
Other names: M. bovigenitalium 51080, Mycoplasma bovigenitalium 51080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.