STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepFOligoendopeptidase F. (608 aa)    
Predicted Functional Partners:
MBVG_2500
ABC transporter, ATP-binding protein.
       0.655
MBVG_2510
ABC transporter, ATP-binding protein.
       0.634
lon
Heat shock ATP-dependent protease.
  
  
 0.516
pepP
XAA-PRO aminopeptidase.
     
 0.474
pepA
Aminopeptidase (Leucine aminopeptidase); Belongs to the peptidase M17 family.
     
 0.449
MBVG_5760
Aminopeptidase, M17 family; Belongs to the peptidase M17 family.
     
 0.449
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
     
 0.430
MBVG_2670
Hypothetical protein; Putative ICE CDS17.
     
 0.410
potA-2
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.403
Your Current Organism:
Mycoplasma bovigenitalium
NCBI taxonomy Id: 1188235
Other names: M. bovigenitalium 51080, Mycoplasma bovigenitalium 51080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.