STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnDAlkylphosphonate ABC transporter, substrate-binding protein, predicted lipoprotein. (439 aa)    
Predicted Functional Partners:
phnB
Alkylphosphonate ABC transporter, permease protein.
 
  
 0.994
phnC
Alkylphosphonate ABC transporter, ATP-binding protein.
 
  
  0.988
MBVG_5600
Hypothetical protein, DUF2714 family.
  
     0.760
uhpT
Hexosephosphate transport protein.
  
     0.757
MBVG_5620
Hypothetical protein, predicted lipoprotein.
  
     0.756
MBVG_5630
Hypothetical protein, predicted transmembrane protein.
  
     0.724
chrA-2
Chromate transport protein; Overlaps another CDS with the same product name.
  
     0.719
MBVG_4890
Hypothetical protein, putative choline/ethanolamine kinase.
 
     0.633
licA
Phosphotransferase system PTS, lichenan-specific IIa component.
  
     0.576
gcdH
Glycine cleavage system H protein.
  
     0.571
Your Current Organism:
Mycoplasma bovigenitalium
NCBI taxonomy Id: 1188235
Other names: M. bovigenitalium 51080, Mycoplasma bovigenitalium 51080
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.