STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1QC_06490Cellulose synthase operon protein YhjQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
A1QC_14185
Cellulose biosynthesis protein BcsE; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.967
A1QC_06495
UDP-forming cellulose synthase catalytic subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
 
  
 0.961
A1QC_06500
Cellulose synthase regulator BcsB; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
  
 0.960
A1QC_06505
endo-1,4-D-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.905
A1QC_06510
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.883
A1QC_14195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.805
A1QC_06485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
A1QC_05780
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
  
 
 0.744
A1QC_07290
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
  
 
 0.744
A1QC_07605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.722
Your Current Organism:
Vibrio rumoiensis
NCBI taxonomy Id: 1188252
Other names: V. rumoiensis 1S-45, Vibrio rumoiensis 1S-45
Server load: low (8%) [HD]