STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMY81860.1Low molecular weight protein tyrosine phosphatase Wzb; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (150 aa)    
Predicted Functional Partners:
EMY82357.1
Rhodanese/metallo-beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
   
   0.869
EMY81441.1
GloB-like glyoxylase II with rhodanese domain; COG0491 Zn-dependent hydrolases, including glyoxylases.
   
   0.869
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
       0.829
EMY81859.1
Tetrapyrrole methylase family protein; COG0313 Predicted methyltransferases.
       0.758
EMY79987.1
Ptk-like tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.702
EMY80124.1
Tyrosine autokinase regulating capsular polysaccharide; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.664
EMY80673.1
Thioredoxin, TRX family protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.645
EMY80068.1
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
  
 
 0.645
EMY80777.1
COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; Belongs to the GcvP family.
    
  0.627
EMY81862.1
acyl-CoA thioesterase, putative; COG0824 Predicted thioesterase.
       0.623
Your Current Organism:
Psychroflexus gondwanensis
NCBI taxonomy Id: 1189619
Other names: P. gondwanensis ACAM 44, Psychroflexus gondwanensis ACAM 44, Psychroflexus gondwanensis DSM 5423, Psychroflexus gondwanensis str. ACAM 44, Psychroflexus gondwanensis strain ACAM 44
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.