STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacATIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (651 aa)    
Predicted Functional Partners:
SJZ35720.1
YbbR domain-containing protein.
 
  
 0.957
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
   
 
 0.952
SJZ37538.1
Phosphoglucomutase.
   
 
 0.797
mutS2
DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.645
SJZ35678.1
Two-component system, OmpR family, response regulator CssR.
  
    0.601
SJZ35640.1
Two-component system, OmpR family, sensor histidine kinase CssS.
       0.598
SJZ35758.1
Pheromone shutdown-related protein TraB.
       0.534
SJZ37650.1
c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains.
 
   
 0.506
SJZ54809.1
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains; Manually curated.
 
     0.412
SJZ90414.1
Phosphoesterase RecJ domain-containing protein.
 
   
 0.401
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.