STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ36316.1Glutamate decarboxylase; Belongs to the group II decarboxylase family. (468 aa)    
Predicted Functional Partners:
SJZ36279.1
Glutamate:gamma-aminobutyrate antiporter, GGA family.
 
 
 0.968
SJZ83073.1
Glutamate:gamma-aminobutyrate antiporter.
 
 
 0.905
SJZ40899.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.880
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
    
 0.879
SJZ91718.1
Chorismate mutase.
  
 
 0.873
SJZ95748.1
Chorismate mutase.
  
 
 0.873
asnA
Aspartate-ammonia ligase.
     
 0.858
SJZ97652.1
Sulfide dehydrogenase (flavoprotein) subunit SudA.
  
 
  0.852
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
  0.852
SJZ76582.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.848
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.