STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ39279.1Protein of unknown function. (150 aa)    
Predicted Functional Partners:
SJZ39284.1
Transcriptional regulator, LytTR family.
 
     0.945
SJZ39275.1
Uncharacterized membrane protein.
       0.548
SJZ39392.1
Predicted transcriptional regulator.
  
 
 0.543
SJZ76092.1
Penicillinase repressor.
  
 
 0.543
SJZ80598.1
Predicted transcriptional regulator.
  
 
 0.543
SKA01240.1
Predicted transcriptional regulator.
  
 
 0.543
SJZ39298.1
Inorganic pyrophosphatase.
       0.535
SJZ54363.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
 
  0.517
SJZ39272.1
Hypothetical protein.
       0.426
SJZ39784.1
Transcriptional regulator, TetR family.
  
     0.426
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.